PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000839_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family B3
Protein Properties Length: 298aa    MW: 34286.2 Da    PI: 6.642
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000839_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.2e-15151234190
                                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT-- CS
                                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk 75 
                                       f+k +++ +v     l+lpk+f+  +        ++t+tlede+g++++  +   + ++r  l++GW+ F+ a +L 
  FANhyb_icon00000839_a.1.g00001.1 151 FLKSMIHCNVVHGFSLTLPKQFCYLYlpF----HDTTITLEDERGEEYRTVY--LGDKRR--LSGGWRAFCVAMNLV 219
                                       89999999***************666432....5679***************..666666..9************** PP

                                       TT-EEEEEE-SSSEE CS
                                B3  76 egDfvvFkldgrsef 90 
                                        gD +vF+l+g  +f
  FANhyb_icon00000839_a.1.g00001.1 220 LGDLLVFHLVGPLKF 234
                                       ********9884333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019366.87E-23145241IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.8E-18146241IPR015300DNA-binding pseudobarrel domain
CDDcd100175.12E-21149237No hitNo description
PfamPF023629.4E-14151234IPR003340B3 DNA binding domain
PROSITE profilePS5086311.815151242IPR003340B3 DNA binding domain
SMARTSM010191.1E-17151242IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
GLTICALHWK MHVLNSEVVT WQSSPLLSLW EFMNLEQENF FQYFQEDEEN PTTIPDLSVP  60
STTTTTTPFD DFTLHSHTSP PSVEQHCQNG FKPWKWKSPL SPIAKRKNAG DPLRHRGYKR  120
KMTKSNYHEK SSVRNQLQDI LANLGPECPF FLKSMIHCNV VHGFSLTLPK QFCYLYLPFH  180
DTTITLEDER GEEYRTVYLG DKRRLSGGWR AFCVAMNLVL GDLLVFHLVG PLKFKVYKVE  240
PDNLTEVDAA FILLKLSLST LFVNYGAEEY HPTPPPKDIC QENIRTTSLE IDAIFLSV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004294826.10.0PREDICTED: B3 domain-containing protein Os06g0194400-like isoform X1
TrEMBLA0A2P6PMJ31e-148A0A2P6PMJ3_ROSCH; Putative transcription factor B3-Domain family
STRINGXP_004294826.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3240622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-29B3 family protein