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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
FANhyb_icon00001650_a.1.g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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| Family |
bHLH |
| Protein Properties |
Length: 187aa MW: 20814.8 Da PI: 8.3198 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| FANhyb_icon00001650_a.1.g00001.1 | genome | kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.1 | 8.5e-05 | 136 | 153 | 2 | 19 |
HHHHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsa 19
r +h++ E+rRR++iN++
FANhyb_icon00001650_a.1.g00001.1 136 RSKHSATEQRRRSKINDR 153
899*************96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
ERNDENSICS SYAGSGFTLW DESAAKKGKT GKENVAERPG LRGQWTSSER PSQSSSTNNR 60
NCFSSQSSGQ KNLSFMEMMK SAAKGCTQED ELADEEEFAL KKEMSTTTTT ATTPYNGELR 120
VKVDAKSSDQ KANTPRSKHS ATEQRRRSKI NDRQVSSQDS LDLLNQQYHV SFSSTFILLR 180
GFRCAEP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
