PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00002805_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 302aa    MW: 34082.4 Da    PI: 4.6082
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00002805_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.71.1e-1049141127
                               NAM  41 kvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgr 112
                                       +vePw++ +++ +   ++++++fF++ +k   +g+r nr + sg+W++    k+v++k  +++ +g k+ L +  ++
  FANhyb_icon00002805_a.1.g00001.1   4 EVEPWTIWEAYGGpflDDQDLFFFTRLKK---HGHRINRRIGSGTWSQGEPFKSVYAKnnQETPIGKKTKLRYE-NK 76 
                                       57999997433335557888999998766...589************99999****985455559999999987.67 PP

                               NAM 113 apkgektdWvmheyr 127
                                       + + ++  W+m+ey+
  FANhyb_icon00002805_a.1.g00001.1  77 QVTEQSGCWFMDEYS 91 
                                       7777999*******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.5081107IPR003441NAC domain
SuperFamilySSF1019413.4E-125105IPR003441NAC domain
PfamPF023651.1E-51491IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MYGEVEPWTI WEAYGGPFLD DQDLFFFTRL KKHGHRINRR IGSGTWSQGE PFKSVYAKNN  60
QETPIGKKTK LRYENKQVTE QSGCWFMDEY SSVDYDGDYV ICRLRENPGK RPSPPPLSKP  120
SDNKRKCQAD PKPSKKTKSL RVSDPQSTIT TNEAGKTVSL NQRPNPEKQF DQSLRLPDSQ  180
AMFLEGTTAA GHIDCAFDTV EMFHHDQEYE TQHFLLEGNT AGHSDYALVE VQRDALSPAA  240
VSEQQHACAS SFAQPNLTDD VFVSENESGN EQLEDTDWLA DDALEDVEGD TLFPALSEKQ  300
TS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465735.10.0PREDICTED: NAC transcription factor ONAC010-like
TrEMBLA0A2P6PGY98e-63A0A2P6PGY9_ROSCH; Putative transcription factor NAM family
STRINGXP_004309935.11e-124(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2193324
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.18e-08NAC-domain protein 101