PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00003888_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 129aa    MW: 14212.3 Da    PI: 10.2785
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00003888_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2262.3e-0898128136
                               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 
                                       ++y+G+r +    +Wv+eIr+p++   +kr++lg+f
  FANhyb_icon00003888_a.1.g00001.1  98 PRYRGIRCR--GEKWVSEIREPRK---TKRIWLGTF 128
                                       68****954..58********843...5*******9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.04799129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-1199128IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-699129IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MADPNTPANN LRQMIEDQPA PTQFILDFPP PPPSPTLPQP PQPPPPPPSH SLALLPLVIP  60
STSEATVVQQ LQLETPKEAT AQQGKSTPMA SSSSGKHPRY RGIRCRGEKW VSEIREPRKT  120
KRIWLGTFP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011463809.19e-67PREDICTED: ethylene-responsive transcription factor ERF027-like
TrEMBLA0A3Q8TED34e-64A0A3Q8TED3_FRAAN; Transcription factor ERF17
STRINGXP_004298779.13e-66(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.15e-16ERF family protein