PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00005788_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 269aa    MW: 31525.9 Da    PI: 10.2599
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00005788_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.84.9e-24361682128
                               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgk 72 
                                       p+GfrFhPtd++l++++L+kkv+++    + ++++ e+d++ ++ePw++ +    ++ ++++++fF+k ++++ +++
  FANhyb_icon00005788_a.1.g00001.1  36 PVGFRFHPTDQQLISYFLHKKVTEEAslYSYKNIVCEFDLFgSTEPWEIWNmygVHELRNQDLFFFTKLKRASLKSS 112
                                       89********************9999876777789999987367*****74243333377799************** PP

                               NAM  73 rknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                       r  r + +sg+W++t  +k ++++ k++++g ++ L +   ++ + ++ +W ++ey+l
  FANhyb_icon00005788_a.1.g00001.1 113 RILRkIGTSGTWSETDASKLIKDEaKQKHIGRRRKLRYE--SKCSKQHGHWYLDEYSL 168
                                       **9955669*************9877788********98..44444689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-2532182IPR003441NAC domain
PROSITE profilePS5100528.50935183IPR003441NAC domain
PfamPF023651.6E-1636168IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MNSASYVLCR LRQNIRKGRK RKEISLRQES PMNYAPVGFR FHPTDQQLIS YFLHKKVTEE  60
ASLYSYKNIV CEFDLFGSTE PWEIWNMYGV HELRNQDLFF FTKLKRASLK SSRILRKIGT  120
SGTWSETDAS KLIKDEAKQK HIGRRRKLRY ESKCSKQHGH WYLDEYSLLD SESDFVICRL  180
RKNDKSSPPS SEWNGNKRTY SALCQESKET LSSVTNKKLL RKQSNETMNV NNNKNNTLSD  240
QPIAQTKRMQ PGTKIKLFGV EIDSDLKYV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11522RKGRKRKE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011466903.10.0PREDICTED: uncharacterized protein LOC105352209
TrEMBLA0A314XQ773e-47A0A314XQ77_PRUYE; NAC domain-containing protein 41-like
STRINGXP_008221120.15e-48(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33280.18e-16NAC domain containing protein 15