PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00006341_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bHLH
Protein Properties Length: 194aa    MW: 21637.3 Da    PI: 6.224
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00006341_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.000111341855
                                      HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                               HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                      + f+ L   lP++      K +  +i+ +Av+YI+sL+
  FANhyb_icon00006341_a.1.g00001.1  1 DMFSSLHAFLPQL----PAKADHCTIVDEAVRYIRSLE 34
                                      57999*******6....399****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.07E-5138No hitNo description
SuperFamilySSF474593.53E-6144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-6145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.439133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048739.93E-6120158No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
DMFSSLHAFL PQLPAKADHC TIVDEAVRYI RSLEDTLQTA QKQKHAKFRS SASSSMTLKA  60
ESRTALGCTK EVVLDPQEEE EPRPSNKLDF ANTPSSTSLD FNTWFPPNVV LNICSNEAHI  120
SVCSPRREGL LSTVFYILEK HKLDVVSAHI SSDQHRCMYM IHPHYASRAC DDTVRAGGLS  180
VEDTFDLAGL QQVN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016647808.11e-61PREDICTED: transcription factor bHLH95-like
TrEMBLA0A2P6Q0K14e-84A0A2P6Q0K1_ROSCH; Putative transcription factor bHLH family
STRINGEMJ279762e-60(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-29bHLH family protein