PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00006922_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 210aa    MW: 24853.1 Da    PI: 5.8542
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00006922_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.86.7e-139110284
                               NAM   2 ppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiy.kvePwdLpkkvka.......eekewyfFskrdkkya 69 
                                        pG rF P d+elv +yLk+ ++g++++  ++v+ ++++y k ePw++ + +k+        +k++yfF+++++ ++
  FANhyb_icon00006922_a.1.g00001.1   9 LPGQRFCPMDDELVLFYLKPMLSGENVPGgNRVVFDCELYgKQEPWEIWEDFKTrrphdlrLNKDIYFFTQHKTMSS 85 
                                       59************************77724569999988456*****753333223333335588*********** PP

                               NAM  70 tgkrknra..........tksgyWk 84 
                                       t+kr +r           +++g W 
  FANhyb_icon00006922_a.1.g00001.1  86 TDKRIRRNkrltyknedsVQNGCWI 110
                                       ***9999746666666665667775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.6388138IPR003441NAC domain
SuperFamilySSF1019415.36E-138137IPR003441NAC domain
PfamPF023654.5E-810110IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MEESRGNQLP GQRFCPMDDE LVLFYLKPML SGENVPGGNR VVFDCELYGK QEPWEIWEDF  60
KTRRPHDLRL NKDIYFFTQH KTMSSTDKRI RRNKRLTYKN EDSVQNGCWI LYEFFLDRSL  120
RDKKQKLKDY VLCLLRKNGE PKTKIAKKRK QREEEEVLEN DDACDDTEIL SGEQEELLET  180
QAKKQRTAPS IDSAPPTMPS QDDLMHSQLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140149PKTKIAKKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465413.11e-137PREDICTED: NAC domain-containing protein 68-like
TrEMBLA0A2P6PAF81e-118A0A2P6PAF8_ROSCH; Putative transcription factor NAM family
STRINGXP_004306296.14e-90(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-09NAC domain containing protein 32