PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00007002_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 51aa    MW: 5617.24 Da    PI: 4.7427
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00007002_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY25.62.4e-083151121
                                      ---SS-EEEEEEE--TT-SS- CS
                              WRKY  1 ldDgynWrKYGqKevkgsefp 21
                                      ++Dg +WrKYGqKe+ ++++p
  FANhyb_icon00007002_a.1.g00001.1 31 VEDGQAWRKYGQKEILNAPYP 51
                                      58***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-72551IPR003657WRKY domain
PROSITE profilePS508119.4082651IPR003657WRKY domain
SuperFamilySSF1182909.15E-72851IPR003657WRKY domain
PfamPF031062.7E-53251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 51 aa     Download sequence    Send to blast
MDSITDQASL IKATSILGKN SESWTTVSST VEDGQAWRKY GQKEILNAPY P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004307738.14e-14PREDICTED: probable WRKY transcription factor 70
STRINGXP_004307738.12e-13(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056