PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00009472_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family MYB_related
Protein Properties Length: 57aa    MW: 6179.21 Da    PI: 10.2159
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00009472_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.13.5e-121546132
                                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
                   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                                      +g+WT+eEd +l+++++ +G ++Wkt+a+  g
  FANhyb_icon00009472_a.1.g00001.1 15 KGAWTAEEDRKLAEYIEIHGAKRWKTVASIAG 46
                                      79**************************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.5E-11943IPR009057Homeodomain-like
PROSITE profilePS5129412.0191057IPR017930Myb domain
SuperFamilySSF466896.53E-91246IPR009057Homeodomain-like
PfamPF002496.3E-101546IPR001005SANT/Myb domain
CDDcd001672.29E-71743No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
MAPKNDGSTK KVMNKGAWTA EEDRKLAEYI EIHGAKRWKT VASIAGLVLS PSLLGLP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011464394.12e-25PREDICTED: transcription factor WER-like isoform X2
RefseqXP_024169376.12e-25transcription factor WER-like
TrEMBLA0A2P6P8K44e-24A0A2P6P8K4_ROSCH; Putative transcription factor MYB-HB-like family
STRINGXP_004299414.17e-25(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3276622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13480.13e-09myb domain protein 79