PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00009794_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

Trihelix

Protein Properties

Length: 170aa MW: 18787.7 Da PI: 4.8437

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00009794_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.9	4.6e-12	122	158	1	37
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskk 37 rW++qe+l+L+e+r++++++++++++k+plW+evs++ FANhyb_icon00009794_a.1.g00001.1 122 RWPRQETLTLLEIRSSLDSKFKETNQKGPLWDEVSRY 158 8**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence Send to blast
VDRVAEIMDD YPDLRQLMAS RTQQFVQFPD PFSVRPFNNY NPNSSIAVGQ QVNTRGLFEF 60 GSAASAPPSF STIISDTSVA ANLNGSTAGS SVGSLYGGLE LMNHQHGWSI NGNDGSAGNN 120 SRWPRQETLT LLEIRSSLDS KFKETNQKGP LWDEVSRYNT LFLPTFSFWV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004308550.1	1e-104	PREDICTED: trihelix transcription factor PTL-like
TrEMBL	A0A2P6SC08	5e-78	A0A2P6SC08_ROSCH; Putative transcription factor MYB family
STRING	XP_004308550.1	1e-103	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21094	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	5e-17	Trihelix family protein