PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00011092_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

WRKY

Protein Properties

Length: 177aa MW: 19487.9 Da PI: 8.0743

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00011092_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	54.1	3e-17	12	49	22	59
EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCt ++C vkk+vers+edp++v++tYeg+H h+ FANhyb_icon00011092_a.1.g00001.1 12 RSYYRCTNSKCIVKKRVERSSEDPTTVITTYEGQHCHH 49 9**********************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	4.8E-8	9	50	IPR003657	WRKY domain
SuperFamily	SSF118290	1.83E-13	10	49	IPR003657	WRKY domain
Pfam	PF03106	7.7E-12	11	49	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	6.4E-15	11	50	IPR003657	WRKY domain
PROSITE profile	PS50811	16.306	12	51	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence Send to blast
MNINLFVPLW RRSYYRCTNS KCIVKKRVER SSEDPTTVIT TYEGQHCHHT VTFPRGSGGG 60 GGVNIISHDQ SGFATGSHHQ LMHQLMQLPP VSQFMHFPTS IQPRSQISPT HNLTVGRSQS 120 HRLVPAGGTH HHYDEAAGGS QCITNQNHEP LPVVPVPTDE GLLGDIVPPG MRNPFDG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004297258.1	1e-103	PREDICTED: probable WRKY transcription factor 57 isoform X1
Refseq	XP_011463029.1	1e-103	PREDICTED: probable WRKY transcription factor 57 isoform X2
TrEMBL	A0A2P6R2N9	1e-95	A0A2P6R2N9_ROSCH; Putative transcription factor WRKY family
STRING	XP_004297258.1	1e-102	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10814	31	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	3e-23	WRKY DNA-binding protein 57