PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00011738_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 198aa    MW: 21949.1 Da    PI: 10.5326
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00011738_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.76.5e-10158176321
                                       -SS-EEEEEEE--TT-SS- CS
                              WRKY   3 DgynWrKYGqKevkgsefp 21 
                                       D+y+WrKYGqK++kgs++p
  FANhyb_icon00011738_a.1.g00001.1 158 DEYSWRKYGQKPIKGSPYP 176
                                       9*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081111.026151176IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-8152176IPR003657WRKY domain
SuperFamilySSF1182902.62E-7154177IPR003657WRKY domain
SMARTSM007742.7E-4156191IPR003657WRKY domain
PfamPF031064.3E-6158177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
PATFPPNQHT QNQKVILGNP VLDMSVNLSL QNVQPKPFQQ LHRIPVHPQQ FTGINLAFNK  60
PSTTPSSSKA ASFMSCLSMD AGRVANYGSN SFRLISGCMP QPMDQISQLM RGADVQQNSS  120
LQCGSSEKCS TPRKRRLRVR KSFKVPEGGK NVAHIPGDEY SWRKYGQKPI KGSPYPSYMQ  180
SLLYIGKTHN WDTISVAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134140RRLRVRK
2135144RLRVRKSFKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004302062.11e-122PREDICTED: probable WRKY transcription factor 74
TrEMBLA0A2P6R5V23e-75A0A2P6R5V2_ROSCH; Putative transcription factor WRKY family
STRINGXP_004302062.11e-121(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26373479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.15e-33WRKY DNA-binding protein 74