PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00011989_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 184aa    MW: 20767.5 Da    PI: 10.2476
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00011989_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.92.4e-09165184221
                                       --SS-EEEEEEE--TT-SS- CS
                              WRKY   2 dDgynWrKYGqKevkgsefp 21 
                                       +D ++WrKYGqK++kgs++p
  FANhyb_icon00011989_a.1.g00001.1 165 SDVWAWRKYGQKPIKGSPYP 184
                                       79****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-7158184IPR003657WRKY domain
PROSITE profilePS5081113.345159184IPR003657WRKY domain
SuperFamilySSF1182902.22E-6162184IPR003657WRKY domain
PfamPF031061.0E-4166184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
LLNMEDDWDL TVVVRGCSTA TTTTTKPTTS FILDHHHHHH FHSSPLLSSS FGQQGFVSNN  60
TSQTQTQTQT FSVLPIVPDP IKPTSAIEEL HDLYKPFFPK SHHKIHTPSL LSPPPQITPQ  120
PNFSSHQQLH KHQPKLSATN TTQRSKKRKN LLKKVCQVPA ESLSSDVWAW RKYGQKPIKG  180
SPYP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011470488.17e-99PREDICTED: WRKY transcription factor 22
TrEMBLA0A2P6SHY34e-79A0A2P6SHY3_ROSCH; Putative transcription factor WRKY family
STRINGXP_004308337.12e-99(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2578322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-19WRKY family protein