PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00012119_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

G2-like

Protein Properties

Length: 86aa MW: 9513.34 Da PI: 9.9633

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00012119_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.3	2.5e-11	60	84	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r+rW+++LHe+Fve+v++LGG++ FANhyb_icon00012119_a.1.g00001.1 60 KTRIRWNQDLHEKFVECVNRLGGAD 84 68*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.2E-8	58	85	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MNQDSTTASV RRPFSLAFKE NQEQVSFFSQ QAKQSSRTSS GTTSATYADS SSTSPSLSSK 60 TRIRWNQDLH EKFVECVNRL GGADSK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004304375.1	5e-52	PREDICTED: probable transcription factor KAN3
Refseq	XP_011468060.1	5e-52	PREDICTED: probable transcription factor KAN3
TrEMBL	A0A2P6RDL2	2e-35	A0A2P6RDL2_ROSCH; Putative transcription factor MYB-HB-like family
STRING	XP_004304375.1	2e-51	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3740	34	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	4e-12	G2-like family protein