PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00013058_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family MYB_related
Protein Properties Length: 68aa    MW: 7664.57 Da    PI: 4.613
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00013058_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.3e-091443130
                                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
                   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                                      +g+W + Ed+ll+d++k +G g W+ +a++
  FANhyb_icon00013058_a.1.g00001.1 14 KGAWLEAEDKLLLDYIKNHGEGKWSNVAKE 43
                                      799*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.5E-12643IPR009057Homeodomain-like
PROSITE profilePS500907.608959IPR017877Myb-like domain
SuperFamilySSF466892.24E-7943IPR009057Homeodomain-like
PfamPF002491.9E-71445IPR001005SANT/Myb domain
CDDcd001676.88E-51643No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MGRGPRCSKD GLNKGAWLEA EDKLLLDYIK NHGEGKWSNV AKETVISADR SKEMWEELPT  60
SLDELSET
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024164756.17e-23transcription factor MYB8-like
TrEMBLA0A2P6PZP22e-21A0A2P6PZP2_ROSCH; Putative transcription factor MYB-HB-like family
STRINGXP_004291264.16e-22(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2200323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35515.13e-13high response to osmotic stress 10