PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00013874_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 131aa    MW: 15576.5 Da    PI: 7.4369
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00013874_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.64e-13912222128
                               NAM  22 kvegkkleleevikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                                       ++++++l+ ++v+ ++d+y   ePw++ +++k+        +k++yfF++++k ++t+k  +r++ sg+Wk   ++k
  FANhyb_icon00013874_a.1.g00001.1   9 EIRNNQLPGKQVVFDCDLYGPqEPWEIWEAYKTrrpndlrLNKDLYFFTQHKKMSSTDKCIRRTVGSGTWKGNDSEK 85 
                                       56777888888999999997549****743333234333334588******************************** PP

                               NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                       +v+s  +g+++g  k +++   ++++ ++  W++ e+ l
  FANhyb_icon00013874_a.1.g00001.1  86 PVKSFeTGRVIGSEKKFTYE--NEESDHHGCWILFEFYL 122
                                       **99768899********98..44445699******976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.7891131IPR003441NAC domain
SuperFamilySSF1019415.62E-1320125IPR003441NAC domain
PfamPF023651.3E-631121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MQQASAMEEI RNNQLPGKQV VFDCDLYGPQ EPWEIWEAYK TRRPNDLRLN KDLYFFTQHK  60
KMSSTDKCIR RTVGSGTWKG NDSEKPVKSF ETGRVIGSEK KFTYENEESD HHGCWILFEF  120
YLDRSLRDKK E
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011468607.14e-81PREDICTED: protein ATAF2-like
TrEMBLA0A2P6PFM01e-63A0A2P6PFM0_ROSCH; Putative transcription factor NAM family
STRINGXP_004306296.12e-63(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.12e-06NAC family protein