PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00015098_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bHLH

Protein Properties

Length: 73aa MW: 8234.41 Da PI: 9.3669

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00015098_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.1	9.8e-06	44	70	1	27
CHHHHHHHHHHHHHHHHHHHHHHHCTS CS HLH 1 rrrahnerErrRRdriNsafeeLrell 27 r++ + rE+ RRdr+N f eL +l FANhyb_icon00015098_a.1.g00001.1 44 RKMQKADREKLRRDRLNVHFMELGNVL 70 6788899****************8765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	5.09E-5	38	70	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	8.619	43	73	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 73 aa Download sequence Send to blast
MQALMDQLRP EPAPQFDSLL PTNRSLPNSS QMPEGEAKDG VAARKMQKAD REKLRRDRLN 60 VHFMELGNVL GTT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004289841.1	5e-36	PREDICTED: transcription factor bHLH121
Refseq	XP_011457920.1	5e-36	PREDICTED: transcription factor bHLH121
TrEMBL	A0A2P6PJ77	3e-30	A0A2P6PJ77_ROSCH; Putative transcription factor bHLH family
STRING	XP_004289841.1	2e-35	(Fragaria vesca)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.2	3e-12	bHLH family protein