PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00017983_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

NF-YB

Protein Properties

Length: 120aa MW: 12986.4 Da PI: 6.9702

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00017983_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	31	6e-10	1	27	69	95
NF-YB 69 walatlGfedyveplkvylkkyreleg 95 wa+++lGf+dy+epl+ +l+kyre+eg FANhyb_icon00017983_a.1.g00001.1 1 WAMGKLGFDDYIEPLSDFLTKYREAEG 27 9***********************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.20.10	2.4E-6	1	30	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence Send to blast
WAMGKLGFDD YIEPLSDFLT KYREAEGINH NSFFMKRERG DGRRKKNAMR GHYGPPGFAL 60 TTHQPGVYEP GAMSGYYRDG EEGGSGSGGV GPISPSLSQG HGQSVVGGGL DPFAQFKLQE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004293185.1	4e-61	PREDICTED: nuclear transcription factor Y subunit B-8-like
TrEMBL	A0A2P6QFW8	5e-32	A0A2P6QFW8_ROSCH; Putative transcription factor Hap3/NF-YB family
STRING	XP_004293185.1	2e-60	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF33015	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	4e-09	nuclear factor Y, subunit B6