PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00018234_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

Dof

Protein Properties

Length: 240aa MW: 26059.6 Da PI: 6.7096

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00018234_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	58.9	1e-18	1	32	32	63
zf-Dof 32 fCkaCrryWtkGGalrnvPvGggrrknkksss 63 fCk+CrryWtkGG+lrnvPvGgg+rknk+sss FANhyb_icon00018234_a.1.g00001.1 1 FCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 32 9***************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-8	1	24	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.0E-13	1	29	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	16.302	1	29	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
FCKSCRRYWT KGGTLRNVPV GGGCRKNKRS SSKRSSQDPQ QPLTPNSNPL LPSLSYDSND 60 LSLAFARLQR SCGQMGFDDH LSMLANPTTN SQSDILSNSS SASPSPGFLD ALRTGFLETH 120 NNNGFPNNLY YGFGSNGGNN MVGEVEMDNG VCGEMGLHPY EELSNVAATT AVTVTTMKQE 180 LSRDIETNNN KVLWGFPWQM NNGDHHNLNM GGGGGGVHHE FDNSGRESWN GLGNPSWHGL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004294679.1	1e-138	PREDICTED: dof zinc finger protein DOF5.3-like
TrEMBL	A0A2P6QHW3	1e-136	A0A2P6QHW3_ROSCH; Putative transcription factor C2C2-Dof family
STRING	XP_004294679.1	1e-137	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5026	30	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	1e-12	Dof family protein