PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00020217_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bHLH

Protein Properties

Length: 67aa MW: 7664.73 Da PI: 9.6354

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00020217_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.7	3.6e-07	37	63	2	28
HHHHHHHHHHHHHHHHHHHHHHHCTSC CS HLH 2 rrahnerErrRRdriNsafeeLrellP 28 r+ + +E++RR++++ ++eL +llP FANhyb_icon00020217_a.1.g00001.1 37 RADRKTIEKNRRNQMKALYSELNSLLP 63 666789********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.89E-5	28	64	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.30E-5	33	64	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.0E-6	37	64	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 67 aa Download sequence Send to blast
VGNWGSWYCR LIGILSQGYS FILFMDQQQY PSSSSCRADR KTIEKNRRNQ MKALYSELNS 60 LLPGTVG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004294013.1	2e-20	PREDICTED: transcription factor bHLH126
TrEMBL	A0A2P6Q481	3e-14	A0A2P6Q481_ROSCH; Putative transcription factor bHLH family
STRING	XP_004294013.1	7e-20	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF906	34	98

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	4e-09	bHLH family protein