PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00020838_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bHLH

Protein Properties

Length: 114aa MW: 13019.8 Da PI: 9.8189

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00020838_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.2	1.9e-05	87	111	5	29
HHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 5 hnerErrRRdriNsafeeLrellPk 29 h ++Er RR++ +++++ L +llP+ FANhyb_icon00020838_a.1.g00001.1 87 HMINERMRREKQKQGYFALHSLLPN 111 7899********************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.15E-5	75	113	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 114 aa Download sequence Send to blast
MDQFIREALE GDFLCYENPP VLMNPSAFVP YSDQRAPRLG NKPPYPGSNS MNVSKRMVQF 60 LRNSCPSSTA KTDAGENEHG KEKGFRHMIN ERMRREKQKQ GYFALHSLLP NGTK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004288441.1	4e-81	PREDICTED: transcription factor bHLH92
TrEMBL	A0A2P6QQ86	2e-50	A0A2P6QQ86_ROSCH; Putative transcription factor bHLH family
STRING	XP_004288441.1	1e-80	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF12572	27	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	3e-15	bHLH family protein