PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00022263_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bHLH

Protein Properties

Length: 86aa MW: 10210.7 Da PI: 10.4677

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00022263_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.7	8.8e-08	59	86	1	28
CHHHHHHHHHHHHHHHHHHHHHHHCTSC CS HLH 1 rrrahnerErrRRdriNsafeeLrellP 28 ++ +h +Er+RR+++ + ++ Lr++lP FANhyb_icon00022263_a.1.g00001.1 59 KKIMHRDIERQRRQEMTTLYASLRSHLP 86 6789***********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.83E-6	50	86	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.489	58	86	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.5E-4	58	86	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.3E-5	59	86	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MYTHSRSHSV LLLIKSSKDH VHLMIPRQID FSQPKRKASI TFGEIDDDQN PDQESKKVKK 60 IMHRDIERQR RQEMTTLYAS LRSHLP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004300739.1	3e-41	PREDICTED: transcription factor bHLH36
TrEMBL	A0A2P6P7I2	2e-25	A0A2P6P7I2_ROSCH; Putative transcription factor bHLH family
STRING	XP_004300739.1	1e-40	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	2e-11	bHLH family protein