PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00025891_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family GRAS
Protein Properties Length: 80aa    MW: 9459.88 Da    PI: 9.9802
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00025891_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS42.88.3e-14175299373
                              GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                                       aceg +r+ r et+++W+ r ++aGF+++pl++++++++k  +++ +   + v+e+ ++++ gWk+r  +   +W
  FANhyb_icon00025891_a.1.g00001.1   1 ACEGINRIVRPETYKQWQIRNTRAGFRQLPLDYEVVNKIKDKVKMEYHPNFVVNEDGHWMLHGWKGRMRLGSACW 75 
                                       7**********************************************999*****************88877777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098511.626156IPR005202Transcription factor GRAS
PfamPF035142.9E-11175IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
ACEGINRIVR PETYKQWQIR NTRAGFRQLP LDYEVVNKIK DKVKMEYHPN FVVNEDGHWM  60
LHGWKGRMRL GSACWAPSTT
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004294644.18e-48PREDICTED: scarecrow-like protein 14
RefseqXP_011461309.13e-48PREDICTED: scarecrow-like protein 14
SwissprotQ3EDH08e-28SCL31_ARATH; Scarecrow-like protein 31
TrEMBLA0A2P6QIX56e-42A0A2P6QIX5_ROSCH; Putative transcription factor GRAS family
STRINGXP_004294644.13e-47(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14801813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07520.13e-30GRAS family protein