PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00026899_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

C2H2

Protein Properties

Length: 122aa MW: 13904.9 Da PI: 10.7644

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00026899_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.2	6.9e-06	80	102	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C C+ksF+++ L +H+++ H FANhyb_icon00026899_a.1.g00001.1 80 SCYVCNKSFPSSQFLYSHMMRsH 102 69******************999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.517	79	102	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	81	102	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence Send to blast
MKSFPAKQMP DYVRYNNGRP LGSYHNARAY SQQRPHSYLL PKKIISKFNP PKQQHQQRYH 60 NPPSSPSNLK AGISSSTSSS CYVCNKSFPS SQFLYSHMMR SHPERGMKGV LPLQQAAPMM 120 MS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011457362.1	4e-64	PREDICTED: uncharacterized protein LOC105349412