PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00030957_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

FAR1

Protein Properties

Length: 131aa MW: 15409 Da PI: 4.3579

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00030957_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.3	6.5e-10	84	125	2	44
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44 fY++Y+ +GFs rk+k k+ g +++r++vCskeg+r+++ FANhyb_icon00030957_a.1.g00001.1 84 FYSFYSLAMGFSFRKEKLDKN-IYGIVVRRQLVCSKEGTRKKK 125 ****************999.8899************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.0E-7	84	125	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence Send to blast
ISKVVGFMDD NGLRFSESNY YDSVENEEVQ SEEEDLEDEP EETLVSNSVD TQNCLHYKGK 60 RYEDLRYEDL KEVDFESVEE VDTFYSFYSL AMGFSFRKEK LDKNIYGIVV RRQLVCSKEG 120 TRKKKGPPKD R

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024165995.1	1e-36	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2P6PJF8	3e-35	A0A2P6PJF8_ROSCH; Putative transcription factor FAR family
TrEMBL	A0A2P6QD18	3e-36	A0A2P6QD18_ROSCH; Putative transcription factor FAR family
STRING	XP_004308577.1	6e-34	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF19973	2	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-06	FAR1 family protein