PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00031931_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 93aa    MW: 10177.9 Da    PI: 4.9005
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00031931_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.91.9e-127093225
                           G2-like  2 prlrWtpeLHerFveaveqLGGse 25
                                      prlrWtp+LH rFv+ave+LGG++
  FANhyb_icon00031931_a.1.g00001.1 70 PRLRWTPDLHLRFVHAVERLGGQD 93
                                      8*********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.2E-116692IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MDGMSGESEC SKTSPSDDRN EEGSSESGEN YDGESNKPKN NGGSSSNSTV EESGDQKKGS  60
VRPYVRSKMP RLRWTPDLHL RFVHAVERLG GQD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004302585.18e-60PREDICTED: probable transcription factor KAN2
TrEMBLA0A2P6R8W93e-51A0A2P6R8W9_ROSCH; Putative transcription factor MYB-HB-like family
STRINGXP_004302585.13e-59(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.19e-18G2-like family protein