PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00033956_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Nin-like
Protein Properties Length: 85aa    MW: 9160.43 Da    PI: 10.3671
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00033956_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK26.61.1e-084974126
                            RWP-RK  1 aekeisledlskyFslpikdAAkeLg 26
                                      aek i+le+l+kyFs+++kdAAk+Lg
  FANhyb_icon00033956_a.1.g00001.1 49 AEKAITLEVLRKYFSGSLKDAAKSLG 74
                                      5899*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    Send to blast
MPSAKSSKLR PQDLNVKGVD CVGEFSTIVE GSFSSVGASK TGEKRRTKAE KAITLEVLRK  60
YFSGSLKDAA KSLGGALSND YFAWR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465572.11e-39PREDICTED: protein NLP5-like isoform X1
RefseqXP_011465573.11e-39PREDICTED: protein NLP5-like isoform X2
TrEMBLA0A2P6PBG78e-35A0A2P6PBG7_ROSCH; Putative transcription factor Nin-like family
STRINGXP_004301980.13e-39(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.11e-13Nin-like family protein