PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00045045_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 50aa    MW: 5871.88 Da    PI: 10.465
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00045045_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00171325113
                                      EEETTTTEEESSH CS
                           zf-C2H2  1 ykCpdCgksFsrk 13
                                      ++C +C k F++ 
  FANhyb_icon00045045_a.1.g00001.1 13 HVCDICYKAFPTG 25
                                      79********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.9E-91336IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    Send to blast
MMMRSTLEKS RKHVCDICYK AFPTGQALGG YKSSHYYKQH QSGKFRPFIK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024164164.15e-14zinc finger protein ZAT1-like
TrEMBLA0A2P6PQV41e-12A0A2P6PQV4_ROSCH; Putative transcription factor C2H2 family
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.23e-08zinc-finger protein 2