PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00046596_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 68aa    MW: 7422.38 Da    PI: 11.5053
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00046596_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.17.8e-172868246
                               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46
                                      ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+
  FANhyb_icon00046596_a.1.g00001.1 28 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAY 68
                                      689******.7*********43...36*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.2E-122868IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-192868IPR001471AP2/ERF domain
SMARTSM003809.3E-132868IPR001471AP2/ERF domain
CDDcd000183.99E-182868No hitNo description
PROSITE profilePS5103217.0032868IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-142968IPR016177DNA-binding domain
PRINTSPR003674.1E-82940IPR001471AP2/ERF domain
PRINTSPR003674.1E-85167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MASATTTATA TKAMSKSSTS SAKAALRRFV GVRQRPSGRW VAEIKDSSQR VRLWLGTYDT  60
PEEAARAY
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008223787.16e-28PREDICTED: ethylene-responsive transcription factor CRF4-like
SwissprotQ6J9S11e-18RA211_ARATH; Ethylene-responsive transcription factor RAP2-11
TrEMBLA0A3Q8TCZ65e-37A0A3Q8TCZ6_FRAAN; Transcription factor ERF44
STRINGXP_008223787.12e-27(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-21related to AP2 11
Publications ? help Back to Top
  1. Meng S, et al.
    Arabidopsis NRT1.5 Mediates the Suppression of Nitrate Starvation-Induced Leaf Senescence by Modulating Foliar Potassium Level.
    Mol Plant, 2016. 9(3): p. 461-470
    [PMID:26732494]