PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon18453807_s.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

Trihelix

Protein Properties

Length: 77aa MW: 8927.04 Da PI: 10.0191

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon18453807_s.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.4	2.9e-11	1	64	27	86
trihelix 27 kkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 k+++W++v+k ++ +++ qC++k+e+l+kry+++k+++++ + s++++f+ ++ FANhyb_icon18453807_s.1.g00001.1 1 KAADWDHVAKTTaatsSSSSPPKTALQCRHKMEKLRKRYRAEKQRASNYPGRFFSSWALFHLMD 64 5789***99966655666688999******************9999999****998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.6E-12	2	66	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 77 aa Download sequence Send to blast
KAADWDHVAK TTAATSSSSS PPKTALQCRH KMEKLRKRYR AEKQRASNYP GRFFSSWALF 60 HLMDEMESDP DRKPIDE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004301730.2	1e-34	PREDICTED: trihelix transcription factor ASIL2-like
TrEMBL	A0A2P6P8Z0	2e-30	A0A2P6P8Z0_ROSCH; Putative transcription factor Trihelix family
STRING	XP_004301730.1	2e-33	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13797	14	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-14	Trihelix family protein