PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon19828183_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 116aa    MW: 13395.9 Da    PI: 7.5055
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon19828183_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.58.2e-1398552128
                               NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmhey 126
                                       k+e+k +yfF++r++ ++t++r  r++ sg+W+ +   ++v+++  ++ ++g+k+ + + +g + + ++  W+m+ey
  FANhyb_icon19828183_s.1.g00001.1   9 KEENKTLYFFTHRKRLSPTSTRFDRKVGSGTWSGQY-PRDVFDEedGSVVIGIKREFRYEEGCDDR-HNKAWLMQEY 83 
                                       3455678*************************9875.5888887667778**********998887.6789****** PP

                               NAM 127 rl 128
                                       ++
  FANhyb_icon19828183_s.1.g00001.1  84 QI 85 
                                       86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.9761100IPR003441NAC domain
SuperFamilySSF1019411.29E-13999IPR003441NAC domain
PfamPF023652.4E-71585IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MYGGGESKKE ENKTLYFFTH RKRLSPTSTR FDRKVGSGTW SGQYPRDVFD EEDGSVVIGI  60
KREFRYEEGC DDRHNKAWLM QEYQIVDDDS DIVLCALRKN HRTPQPAQSS SVVGKT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011459317.13e-81PREDICTED: transcription factor JUNGBRUNNEN 1-like
TrEMBLA0A2P6QEP27e-49A0A2P6QEP2_ROSCH; Putative transcription factor NAM family
STRINGXP_004308530.15e-27(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1761026
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.31e-07NAC family protein