PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon20152345_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 136aa    MW: 14855.7 Da    PI: 4.4144
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon20152345_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.81.1e-071243356
                               AP2 33 lgkfgtaeeAakaaiaarkklege 56
                                      lg+f t+eeAa a+++a+k+++g+
  FANhyb_icon20152345_s.1.g00001.1  1 LGTFNTPEEAALAYDQAAKRIRGN 24
                                      79*******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.9E-9132IPR016177DNA-binding domain
CDDcd000181.76E-12130No hitNo description
PfamPF008473.1E-4123IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-12132IPR001471AP2/ERF domain
SMARTSM003805.8E-4137IPR001471AP2/ERF domain
PROSITE profilePS5103211.245131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
LGTFNTPEEA ALAYDQAAKR IRGNKAKLNF PATPAPAPAP ARLQPPSKKR CMAPESTQSS  60
ALAMMGMGPY YPPFQNECYS KSETTADHDH EYELKEQILS LEKILGLDEP VTPNEVTSGL  120
GMGEPESSDL WMLDDL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011462742.12e-95PREDICTED: ethylene-responsive transcription factor RAP2-3
TrEMBLA0A3Q8TBG55e-94A0A3Q8TBG5_FRAAN; Transcription factor ERF54
STRINGXP_004296870.18e-95(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48923353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.18e-19ethylene-responsive element binding protein