PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon20341735_s.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

G2-like

Protein Properties

Length: 121aa MW: 13870.7 Da PI: 10.8436

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon20341735_s.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.1	1.3e-20	83	120	2	39
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk FANhyb_icon20341735_s.1.g00001.1 83 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVK 120 9***********************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.05E-7	80	120	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.7E-16	81	120	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.8E-14	83	120	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence Send to blast
MGGFESTRFN GITMESLRVP QHQLQYLNHQ QQQQLQHQHQ CGAGVGIGAH HHLHGDFSSN 60 NGFIMRSRFT PKSYQSKRNM RAPRMRWTSS LHARFVHAVE LLGGHERATP KSVLELMDVK 120 D

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011464470.1	2e-64	PREDICTED: transcription repressor KAN1 isoform X2
TrEMBL	A0A2P6P1N4	2e-46	A0A2P6P1N4_ROSCH; Putative transcription factor MYB-HB-like family
STRING	XP_004299501.1	7e-63	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1756	33	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-28	G2-like family protein