PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon20542870_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 187aa    MW: 20763.7 Da    PI: 8.6079
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon20542870_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.0012929121
                                      EEETTTTEEESSHHHHHHHHH CS
                           zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                                      ++C++C++ ++++  L+ H+ 
  FANhyb_icon20542870_s.1.g00001.1  9 HVCQICKQKYPSNNKLHAHLI 29
                                      79*****************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002801132IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
LDEVALKRHV CQICKQKYPS NNKLHAHLID SHYRKPCPSN QIEPPSSNSA IISTPDKPSE  60
ETILSETTSL PTIVTSTAAR SNAPPGHAFQ GRRYAQLLIS IASPHNEQAN VCLDTGCAMS  120
LIDRTFLRCQ HPTAKIQQME KPVKVRGLGS SLHDASTFTE IDFYVRGKDN VIAHFKREIH  180
IVEKLTA