PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_iscf00214002_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 107aa    MW: 11678.7 Da    PI: 4.5174
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_iscf00214002_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.21.1e-092371755
                               AP2 17 AeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                      AeIrd +     +  r +lg++ tae+A ka++++++++e+
  FANhyb_iscf00214002_s.1.g00001.1  2 AEIRDpF-----TkSRLWLGTYNTAEDASKAYEEMKLYFEK 37
                                      9****66.....34**********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-11136IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-7135IPR016177DNA-binding domain
PROSITE profilePS5103211.509146IPR001471AP2/ERF domain
PIRSFPIRSF0381232.6E-151105IPR017392AP2/ERF transcription factor ERF/PTI6
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
AAEIRDPFTK SRLWLGTYNT AEDASKAYEE MKLYFEKKLS LATASEVSSE KSNNNTTTSC  60
SVVVSRSVNT QQPAVSSEEE SECVYSQRSP ASVLDVETCA SNNIHSG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004299085.18e-65PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_004299086.18e-65PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A3S8T9342e-62A0A3S8T934_FRAAN; Transcription factor ERF47
STRINGXP_004299085.13e-64(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.17e-11ERF domain protein 11