PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000064.1.g00025.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 260aa    MW: 28980.9 Da    PI: 7.8655
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000064.1.g00025.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_155.31.4e-17190244458
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                                     ++r +r++kNRe+A rsR+RK+a++  Le +++ L +eN++L+ e+e+l++ +a+
  FANhyb_rscf00000064.1.g00025.1 190 DRRHKRMIKNRESAARSRARKQAYTNDLEIRIQLLMEENERLRRENEQLSDAAAS 244
                                     6899**********************************************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-14187251IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.358189240IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.0E-14190241No hitNo description
PfamPF001703.3E-15191244IPR004827Basic-leucine zipper domain
CDDcd147072.45E-24191245No hitNo description
SuperFamilySSF579591.19E-11191240No hitNo description
PROSITE patternPS000360194209IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MMSSTGSEET HYNSSSLSSS TTTPPSPFSQ ATPRSRTMEE VWKDINLASL SNANNSPNFR  60
NMTLQDFLAR PFANVVSPTP DHQHHNNNHI TLNSSPPPPP PPATVLSLNH MDSDQFQLFC  120
IENLNTTRPF VNLNHPNTTV SEKSFNGAYP FEGLGSQSSP SPGLVMPSGF GYGNERLPEP  180
DDRSNFGGGD RRHKRMIKNR ESAARSRARK QAYTNDLEIR IQLLMEENER LRRENEQLSD  240
AAASQLPKKH SLNRSSTATF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004289074.11e-141PREDICTED: protein FD
TrEMBLA0A2P6RLS89e-87A0A2P6RLS8_ROSCH; Putative transcription factor bZIP family
STRINGXP_004289074.11e-141(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-20bZIP family protein