PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000099.1.g00007.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Trihelix
Protein Properties Length: 371aa    MW: 40340.6 Da    PI: 9.8676
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000099.1.g00007.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.23.2e-1622127286
                        trihelix   2 WtkqevlaLiearremeerlrrgk...................lkkplWeevskkmrergferspkqCkekwenlnkry 61 
                                     Wt  e+++Liea++ +eer   ++                    ++ +W++v ++++++g+ rs++qC++kw+nl ++y
  FANhyb_rscf00000099.1.g00007.1  22 WTVGETMVLIEAKKMDEERRVMKRsgsssrdhgadetprsiikPAELRWKWVEDYCWKKGCLRSQNQCNDKWDNLMRDY 100
                                     *************95555544322234556667777777777799********************************** PP

                        trihelix  62 kkikegekkrt..sessstcpyfdqle 86 
                                     kk++e e++ +   ++ ++ p + +le
  FANhyb_rscf00000099.1.g00007.1 101 KKVREYERRSSvvGGENKELPSYWKLE 127
                                     *******99743355556666666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.261497IPR017877Myb-like domain
PfamPF138372.7E-1121127No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MAEIQGGNSG SFVMRDYRKG NWTVGETMVL IEAKKMDEER RVMKRSGSSS RDHGADETPR  60
SIIKPAELRW KWVEDYCWKK GCLRSQNQCN DKWDNLMRDY KKVREYERRS SVVGGENKEL  120
PSYWKLEKSE RKERNLPTNM VPQIYEALVE VVEKREMGRI VVGGNGGGGG GGGGASISGS  180
ISPNPNIGYV VERPMISGVH HSTVLSPPPV MQQQLIQAQP IAAVHLLPAP LAAQPPPPLP  240
YSQPIPPVAF RLTSQKRRGG GGGGRASGGG GDQQQGISTS GTVSAGTSSE VGTAISRGAS  300
IIAEALQGCE EREERRHREI LSMHGKRIQI EETKTEINRQ GISGLVDAIN KLANSIHALA  360
SNNQSQSSAP K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1262270GGRASGGGG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011460456.10.0PREDICTED: uncharacterized protein LOC101296473 isoform X2
TrEMBLA0A2P6Q7271e-180A0A2P6Q727_ROSCH; Putative transcription factor MYB family
STRINGXP_004295476.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.13e-58Trihelix family protein