PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00000133.1.g00009.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

FAR1

Protein Properties

Length: 92aa MW: 10679.8 Da PI: 9.2718

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00000133.1.g00009.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.7	2.2e-09	31	83	22	72
FAR1 22 skrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek 72 + ng i++r++vC+keg+r+ +k+ e++r r etrt C akl+++ ++ FANhyb_rscf00000133.1.g00009.1 31 GESNGLIKRREWVCNKEGTRKANKSLeqGESSRYARRETRTLCGAKLRIRYRH 83 467999************999877546677779************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.5E-7	32	83	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 92 aa Download sequence Send to blast
MDASGNEEQL TMNPSENEEQ PSSGFEDGDK GESNGLIKRR EWVCNKEGTR KANKSLEQGE 60 SSRYARRETR TLCGAKLRIR YRHTVRQPKF MW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004306860.2	3e-36	PREDICTED: uncharacterized protein LOC101300183
Refseq	XP_011457288.1	7e-38	PREDICTED: uncharacterized protein LOC105349381
STRING	XP_004292074.1	7e-17	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15759	4	9