PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000181.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family HRT-like
Protein Properties Length: 174aa    MW: 19526.4 Da    PI: 10.2132
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000181.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like382.8e-1260781331
                        HRT-like 13 krqPvkgRKRCeeHKGmRi 31
                                     ++Pv+gRKRC+eHKGmRi
  FANhyb_rscf00000181.1.g00001.1 60 ATPPVQGRKRCAEHKGMRI 78
                                    689***************7 PP
2HRT-like52.21e-16129157331
                        HRT-like   3 GviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                                     G+il dGs C+++P++gRKRC eHKG+Ri
  FANhyb_rscf00000181.1.g00001.1 129 GFILPDGSRCRTEPIQGRKRCDEHKGRRI 157
                                     99**************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MILKAIPNSV VNRQFSKLCS TDTISGHPDD VLQRLKKISS KPARLILSRG FYLSDRSKLA  60
TPPVQGRKRC AEHKGMRIKA SITVRISDNN VDSKCSVLSN KELDSHDASN VKFETVEFHV  120
SESSTLIFGF ILPDGSRCRT EPIQGRKRCD EHKGRRIQKS NSKSVKEEEV EICA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024181854.16e-57protein EFFECTOR OF TRANSCRIPTION 2-like isoform X2
TrEMBLA0A2P6RK911e-55A0A2P6RK91_ROSCH; Putative transcription factor HRT family
STRINGXP_004288924.11e-32(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3397922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26170.11e-13