PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000344.1.g00009.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 409aa    MW: 45395.2 Da    PI: 7.1931
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000344.1.g00009.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1537.6e-17267329163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     ek+lkre+rkq NRe+ArrsR RK+ae eeL + +++L++e ++Lk+el++ k  ++kl+ e+
  FANhyb_rscf00000344.1.g00009.1 267 EKQLKREKRKQANRESARRSRMRKQAEYEELVKSCDSLSTEQMDLKSELDQVKVAAEKLRLEN 329
                                     89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-10266326No hitNo description
PfamPF001701.4E-14267329IPR004827Basic-leucine zipper domain
SMARTSM003384.0E-13267331IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.001269332IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-9271319No hitNo description
CDDcd147021.27E-14272318No hitNo description
PROSITE patternPS000360274289IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MKMKAMEIRV KGQGSNLRGA PSSALDCCKS RDVRTFTGLR TSSLDPNWCH IDPLRQSRYF  60
SFSTSTAALP SSQPPRFPAS YYDVVLLQIN PPKLKAGNLK IPRLLKDNMG QDVTKKLKGS  120
DGHAVPISYT SPISFEENED DLTGGADGNT RADHHTQGKR GLRACDLLVW FKHLWLIFVA  180
HPSAVCLEGL NMTIYFMLTR LFSNLMTDTD VEVHPNYEGD TNRNFTSSSD FVQVPIGSLY  240
ENIGTSTAIF SPSAGERLPF DAMALDEKQL KREKRKQANR ESARRSRMRK QAEYEELVKS  300
CDSLSTEQMD LKSELDQVKV AAEKLRLENA ALKEQLKNAQ ILQEGGNGSP KTEGDVTLPN  360
DAKDILSNLG TVSSNTQLDC ETHETSSETI TRLNQLLESS SRADAVAAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1283290RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011463954.11e-170PREDICTED: common plant regulatory factor 1-like
RefseqXP_011463955.11e-170PREDICTED: common plant regulatory factor 1-like
RefseqXP_011463956.11e-170PREDICTED: common plant regulatory factor 1-like
RefseqXP_011463957.11e-170PREDICTED: common plant regulatory factor 1-like
TrEMBLA0A2P6P6E91e-132A0A2P6P6E9_ROSCH; Putative transcription factor bZIP family
STRINGXP_004298865.11e-169(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15470810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-22G-box binding factor 3