PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00000434.1.g00002.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

FAR1

Protein Properties

Length: 281aa MW: 32879.7 Da PI: 5.2854

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00000434.1.g00002.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.4	1e-22	69	157	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevt 79 +fY +Y++++GF+vr++++++s++n+ ++ ++fvC ++ ++ ++ + ++tr gC a+l+v +++ +kw+vt FANhyb_rscf00000434.1.g00002.1 69 EFYIAYGRHTGFTVRIHHNRRSRMNNMVIGQDFVCEGFRDKKYVYRD-NRVLPPPPVTREGCAAMLRVALRDGDKWVVT 146 6********************************655555555555.66667999******************* PP FAR1 80 kleleHnHela 90 k+++eHnH+l+ FANhyb_rscf00000434.1.g00002.1 147 KFVKEHNHTLM 157 *******97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.2E-20	69	157	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
METESYNNIN NNPFDSDESQ SCELPNDVDL CSGEVDKIIE QSNGSSHLMG NPIEPYIGME 60 FKSRDRAREF YIAYGRHTGF TVRIHHNRRS RMNNMVIGQD FVCEGFRDKK YVYRDNRVLP 120 PPPVTREGCA AMLRVALRDG DKWVVTKFVK EHNHTLMSPS KVPWRGSGKT LINEDEKDRK 180 IMELTIELSN ERQQCKRRCA AYQDQLNRLL KDIQDHSDHL SERVQDMSLM NTLEDIDVAY 240 QDQLNRLLKD IQDHSDHLSE RVQDIVKNIR ELESEQYEDS E

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004290123.1	1e-170	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2P6PTW2	1e-156	A0A2P6PTW2_ROSCH; Putative transcription factor FAR family
STRING	XP_004290123.1	1e-170	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8861	30	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	5e-36	FAR1 family protein