PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000529.1.g00004.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 394aa    MW: 45243.1 Da    PI: 4.4173
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000529.1.g00004.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.44.2e-2112109193
                             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkr 73 
                                     lp Gf+F Ptd+el+ +yL +kv gk+++ ++  + e+++yk ePwdL +     ++ ++ +++y F++ +kk+++g++
  FANhyb_rscf00000529.1.g00004.1  12 LPSGFKFLPTDQELLGYYLLNKVLGKPFKYDSRvMIELNLYKEEPWDLWNrfgapRL-NQGEDLYIFTELKKKSNNGSN 89 
                                     699************************888655499************753444333.256799*************** PP

                             NAM  74 knratksgyWkatgkdkevl 93 
                                      +r+t sg+Wk+   d +++
  FANhyb_rscf00000529.1.g00004.1  90 VSRTTGSGTWKEYKLDDSLI 109
                                     ***********988777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-236106IPR003441NAC domain
PROSITE profilePS5100520.55112153IPR003441NAC domain
PfamPF023657.7E-1013103IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MASSSCVSGF NLPSGFKFLP TDQELLGYYL LNKVLGKPFK YDSRVMIELN LYKEEPWDLW  60
NRFGAPRLNQ GEDLYIFTEL KKKSNNGSNV SRTTGSGTWK EYKLDDSLIP KSCRGRDLVL  120
SRIRKDRKRK LIEDQMNDTK QCPCTKVARV EETNDVKSTH GIRPILNDDT NLPASFTQFL  180
ATEEEQQLQQ QQELDSNKML EEQQDPQLLP SPSHFHEQQQ LLGNELIFPS DHYIFQSVGT  240
YDPVNDREHE SYVMSTYENQ ILNEDNNTMA SCFTRWLSSG DEEQQQPQQE VQPNKMCEGQ  300
PSMSFEHILG NHLMVSRDNE PQNAQPHSDI LTSQEPNHFG IPTEIDEGQF NHYFMVNELF  360
SGDLDDELSD SAALKFSSLD DDVFNGIDLT TIGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-141012213116Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123130RKDRKRKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011459730.10.0PREDICTED: NAC domain-containing protein 100-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3414422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.26e-20NAC domain containing protein 50