PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00001319.1.g00006.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 254aa    MW: 28526.9 Da    PI: 8.8625
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00001319.1.g00006.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.52.2e-112253255
                         G2-like 32 ilelmkvkgLtlehvkSHLQkYRl 55
                                    +l+lm++kgL+++hvkSHLQ+YR+
  FANhyb_rscf00001319.1.g00006.1  2 VLQLMNIKGLSIAHVKSHLQMYRS 25
                                    89*********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.1E-10226IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MVLQLMNIKG LSIAHVKSHL QMYRSKKIDD AGQVIGDQGH HLVECGDKNI YNLSQLPMLQ  60
GYNRSHMSTS FRYGYGDSNS WSTSAFENLR HPRSTSGIFQ GTIAEKLFGS STSNWNSTAY  120
SNFRTSSEQV PSWITHTLKD ECSQLYNIRR QSLQAHQARL SIIDHLNPTT HVQPKANDHF  180
TSLSSTATNL QELKTLKRKA SDCDLDLDLS LRLTTKNNDE SPRSTTLKDN EVDCTSLSLS  240
LYSPASAKLS RVKE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004302585.10.0PREDICTED: probable transcription factor KAN2
TrEMBLA0A2P6R8W91e-156A0A2P6R8W9_ROSCH; Putative transcription factor MYB-HB-like family
STRINGXP_004302585.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.16e-28G2-like family protein