PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00001516.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 115aa    MW: 13331.7 Da    PI: 8.5344
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00001516.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_174.31.6e-231274163
                                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                                    e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L+ eN +L++e+++++ e+++l se+
  FANhyb_rscf00001516.1.g00001.1 12 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENATLRSEVNRIRSEYEQLLSEN 74
                                    89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.8E-17971No hitNo description
SMARTSM003384.6E-221276IPR004827Basic-leucine zipper domain
PfamPF001705.4E-221274IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.2421477IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-121571No hitNo description
CDDcd147023.02E-141767No hitNo description
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MSVLTNLNQL DERELKRQRR KQSNRESARR SRLRKQAECD ELAQRAEVLK DENATLRSEV  60
NRIRSEYEQL LSENASLKVR LGEIPGHEDL RSGRSDQHLS NDTNQTAQTE LHGGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834RRSRLRK
22835RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465109.12e-67PREDICTED: transcription factor HBP-1a-like
RefseqXP_011465110.12e-67PREDICTED: transcription factor HBP-1a-like
SwissprotQ84LG21e-32BZP68_ARATH; bZIP transcription factor 68
TrEMBLA0A2P6PAM53e-65A0A2P6PAM5_ROSCH; Putative transcription factor bZIP family
STRINGXP_004300190.16e-67(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.16e-35basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]