PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00001791.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ARR-B
Protein Properties Length: 633aa    MW: 70565.7 Da    PI: 5.9662
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00001791.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.71.2e-23321370151
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                     k +++WtpeLH++Fv+aveqL G ++A+P++ilelmk +gLt+++v+SHLQ
  FANhyb_rscf00001791.1.g00001.1 321 KMKVDWTPELHKKFVHAVEQL-GVDQAIPSRILELMKAEGLTRHNVASHLQ 370
                                     5689*****************.****************************9 PP
2Response_reg31.31e-11301361109
                                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEE CS
                    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiiv 76 
                                     vl+ d++ +    +r+ le  +y +v+++ + +eal  + ++   +++ ++ i+ ++   G+++l + +    ++pii+
  FANhyb_rscf00001791.1.g00001.1  30 VLLLDEDTSYSAEIRSKLEAMDY-IVTTFCNETEALSAFSNNPesFHVAIVEINTSKgDWGFKFLDTAK----DMPIIM 103
                                     799999*****************.***************888888***********9899**9998754....588999 PP

                                     EESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                    Response_reg  77 vtahgeeedalealkaGakdflsKpfdpeelvk 109
                                      +     +++ +++ +Ga +fl Kp  +e+l++
  FANhyb_rscf00001791.1.g00001.1 104 TSNIHCLNTMMKCIALGAVEFLRKPLCEEKLRN 136
                                     988888********************9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.1E-1526169No hitNo description
SuperFamilySSF521723.7E-1526144IPR011006CheY-like superfamily
SMARTSM004480.001628138IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011019.88629142IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.4E-830136IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.93E-931141No hitNo description
PROSITE profilePS5129411.312318378IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.1E-22319370IPR009057Homeodomain-like
SuperFamilySSF466891.02E-13320370IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-20321370IPR006447Myb domain, plants
PfamPF002491.1E-6324370IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    Send to blast
DGLRNDATSA MVCTASDLEG WKDFPKGLRV LLLDEDTSYS AEIRSKLEAM DYIVTTFCNE  60
TEALSAFSNN PESFHVAIVE INTSKGDWGF KFLDTAKDMP IIMTSNIHCL NTMMKCIALG  120
AVEFLRKPLC EEKLRNIWQH VVHKAFNAGG KAVSESIKSV KEFVLPMLQP KLENEPPKCK  180
ISVVTENAAR VPEHDHEQST GNDKYPAPST PQIKQGSRLL DDGDCQEQTN SSEKESGEHD  240
GESKSVETTC GNADDTLQIS EPQMPEKIVV KQENDSADAS KLENNLSQPH IRDCTNDTGC  300
ATENLSKASG LNHSYKSSRK KMKVDWTPEL HKKFVHAVEQ LGVDQAIPSR ILELMKAEGL  360
TRHNVASHLQ FQSLSPVLEY HTSSKLKYRM HKRHILPKDE DRRLLHPRDP TQMSYYPHKP  420
IMAFPPYHYN SAVSMPGVYP MWGQPASHPA NIQMWGQPGY PPWQASENWH WKPSYQALHA  480
DAWGCPVMPQ PLQGGYSSYP QTASGVHNPN VVDNGCSMPH NSSELHPIAS AVNNANVADN  540
GCSMAHDSSE LNLIEFQFIA FQLKEYEKEA MVLLMGKQDA EEIIDKVMKE AMSKPWLPLP  600
LGLKLPSTEG VLAELSRQGI CNIPPPIDDS NSC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004300274.10.0PREDICTED: two-component response regulator-like APRR2 isoform X1
RefseqXP_011465179.10.0PREDICTED: two-component response regulator-like APRR2 isoform X1
RefseqXP_011465180.10.0PREDICTED: two-component response regulator-like APRR2 isoform X1
RefseqXP_011465181.10.0PREDICTED: two-component response regulator-like APRR2 isoform X1
RefseqXP_011465182.10.0PREDICTED: two-component response regulator-like APRR2 isoform X1
TrEMBLA0A2P6P9P60.0A0A2P6P9P6_ROSCH; Putative response regulator and transcription factor RR-A-type family
STRINGXP_004300274.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35663465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.51e-137ARR-B family protein