PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00002144.1.g00003.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

G2-like

Protein Properties

Length: 236aa MW: 27208.6 Da PI: 8.8093

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00002144.1.g00003.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	28.2	4.3e-09	103	154	5	50
G2-like 5 rWtpeLHerFveaveqLGGse..kAtPktilelmk....vkgLtlehvkSHL 50 Wt e H+r v+av qLGG + k+t ++l+lm+ ++gLt + + HL FANhyb_rscf00002144.1.g00003.1 103 SWTLEHHRRVVRAVIQLGGLNssKTTAEAVLKLMDeedrLQGLTAKMIEHHL 154 7****************643389*******833335799999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.5E-7	98	154	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence Send to blast
MSRFGVEGNR GGTMTPISEW TLEQHKQFLD TFILLGGDKE KVGVHTVLKA ELLSLAGCSC 60 RTFFPDFHIT SLEILQRRSQ ALFSSDEVTL DSLYVAPKKM SSSWTLEHHR RVVRAVIQLG 120 GLNSSKTTAE AVLKLMDEED RLQGLTAKMI EHHLVGLYGL QKETQRLMAF CEKEIEQSFW 180 DLRYLVRKGL YYVLFTKIKE NPHLRQHLEL LKQVSMAQWI QFHIIKSERE VLKAFG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF34475	2	2