PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00002213.1.g00002.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

NF-YB

Protein Properties

Length: 205aa MW: 23474.9 Da PI: 5.6828

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00002213.1.g00002.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	31.1	5.7e-10	121	152	21	50
NF-YB 21 lPanakis..kdaketvqecvsefisfvtsea 50 l +akis +daket+qecvse+isf+ ++a FANhyb_rscf00002213.1.g00002.1 121 LSPHAKISssDDAKETIQECVSEYISFIMGNA 152 677899953389****************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.20.10	1.7E-6	121	152	IPR009072	Histone-fold
Pfam	PF00808	1.8E-4	130	153	IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence Send to blast
MHSPHPQRHE QDASNYQQKH LHHIDPSNFK WQCIYVFLVY DANQGSQGRG EELHGRRWCI 60 NKSLDSLYGS HLKEGNCCRT EGCMFPVSVR QTGHKSPLIQ SAFDRFMSIL DSQCDQNDEN 120 LSPHAKISSS DDAKETIQEC VSEYISFIMG NAWLRDVHSL DINRQNSAEG LGFNSLRAEL 180 EEDVSIKDSY MQVAYNNDQG DLQLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.1	1e-09	nuclear factor Y, subunit B6