PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00003541.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ZF-HD
Protein Properties Length: 88aa    MW: 9808.99 Da    PI: 8.0571
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00003541.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer92.44e-292074359
                     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                                    +vrY eC+kNhAa + g+avDGC+Efm+s geeg +aal+CaACgCHRnFHRreve+
  FANhyb_rscf00003541.1.g00001.1 20 NVRYVECQKNHAAGVRGYAVDGCREFMAS-GEEG-TAALTCAACGCHRNFHRREVET 74
                                    79**************************9.6664.689****************875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257743.0E-17183IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047706.4E-272072IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.0E-242272IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152324.3962371IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MRKRQVVVRR EEPSSYTIRN VRYVECQKNH AAGVRGYAVD GCREFMASGE EGTAALTCAA  60
CGCHRNFHRR EVETVCECSS PTSTHEAA
Functional Description ? help Back to Top
Source Description
UniProtInhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011467968.11e-56PREDICTED: mini zinc finger protein 2
SwissprotQ9LJW55e-35MIF2_ARATH; Mini zinc finger protein 2
TrEMBLA0A2P6S4M86e-52A0A2P6S4M8_ROSCH; Putative transcription factor ZF-HD family
STRINGXP_004304308.16e-56(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF155034100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.11e-25mini zinc finger 2
Publications ? help Back to Top
  1. Bollier N, et al.
    At-MINI ZINC FINGER2 and Sl-INHIBITOR OF MERISTEM ACTIVITY, a Conserved Missing Link in the Regulation of Floral Meristem Termination in Arabidopsis and Tomato.
    Plant Cell, 2018. 30(1): p. 83-100
    [PMID:29298836]