PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G000520_P01
Common NameEREB127, ZEAMMB73_306194
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 259aa    MW: 27019.7 Da    PI: 6.3055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G000520_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-1672120356
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                        y+G+r ++ +g+Wv+eIr+p+    + +r++lg++ t+e+Aa+a++ a+++l+g+
  GRMZM2G000520_P01  72 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTYPTPEMAAAAYDVAARALRGA 120
                        9***9.55.6*********94....36*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.03371127IPR001471AP2/ERF domain
SMARTSM003806.9E-2671133IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-1871127IPR016177DNA-binding domain
PfamPF008472.3E-972119IPR001471AP2/ERF domain
CDDcd000184.68E-1772127No hitNo description
Gene3DG3DSA:3.30.730.105.5E-2672127IPR001471AP2/ERF domain
PRINTSPR003676.8E-67283IPR001471AP2/ERF domain
PRINTSPR003676.8E-6109129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAEQQPPHSP YPAVQVQRPG PPAGHSRQAG SASASPHSPS PVVQGDYYGT AAAAATSSGE  60
PSPRSSGKHA FYRGIRCRSG KWVSEIREPR KARRIWLGTY PTPEMAAAAY DVAARALRGA  120
DAVLNFPGAI ASRAAPASAS PADIRAAAAA AAQAQLEYSQ SQGAASNPLA AAAAQGRHQQ  180
QHHGASSTAT ADAAGYTAPQ QEMGTDEFMD EEAIFEMPQL LRNMAAGMMM SPPRLSPDTS  240
DESPDPSEAG ESLWSYHDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-12681271172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G000520
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G000520_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277030.0KJ727703.1 Zea mays clone pUT5642 AP2-EREBP transcription factor (EREB127) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008678939.10.0ethylene-responsive transcription factor ERF027
SwissprotQ9FJ908e-49ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A3L6F8V90.0A0A3L6F8V9_MAIZE; Ethylene-responsive transcription factor ERF025
TrEMBLK7UY400.0K7UY40_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G000520_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36542762
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-22ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]