PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G002119_P01
Common NameEREB158
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 186aa    MW: 19649.3 Da    PI: 10.7303
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G002119_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.8e-182878256
                AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       +y+GVr ++ +gr++ eIrd ++    ++r++lg+f+t+ eAa a++ a++ l+g+
  GRMZM2G002119_P01 28 HYRGVRKRP-WGRYATEIRDpWK----KTRVWLGTFDTPVEAALAYDCAARTLRGA 78
                       6********.**********883....5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-112877IPR001471AP2/ERF domain
PROSITE profilePS5103221.472885IPR001471AP2/ERF domain
CDDcd000188.98E-282887No hitNo description
SuperFamilySSF541711.05E-202886IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-302886IPR001471AP2/ERF domain
SMARTSM003801.9E-322891IPR001471AP2/ERF domain
PRINTSPR003674.6E-102940IPR001471AP2/ERF domain
PRINTSPR003674.6E-105167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MDPTLRAVLS RGGGGSGGAR GGGGGGAHYR GVRKRPWGRY ATEIRDPWKK TRVWLGTFDT  60
PVEAALAYDC AARTLRGAKA KTNFPADHAA QAQQQRQRLR LAPLLRQPPP RHVSFGGVDV  120
HVDCPTPWHS VCLQTTQTAA AAAAPLPTTA PMPLASEPPS TALALELGTG RSRAGLPFDL  180
NEAPSC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-202685363ATERF1
3gcc_A2e-202685363ATERF1
5wx9_A1e-191888475Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G002119
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G002119_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7282610.0KJ728261.1 Zea mays clone pUT6538 AP2-EREBP transcription factor (EREB158) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008674936.21e-132ethylene-responsive transcription factor 12
TrEMBLA0A060D2K51e-130A0A060D2K5_MAIZE; AP2-EREBP transcription factor (Fragment)
TrEMBLA0A3L6FHT21e-130A0A3L6FHT2_MAIZE; Ethylene-responsive transcription factor 12
STRINGGRMZM2G002119_P011e-131(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-33ERF domain protein 12